"Towards a Genome Sequence of the Brown Spot Needle Blight Pathogen (My" by Benjamin Douglas Bartlett
 

Theses and Dissertations

Issuing Body

Mississippi State University

Advisor

Peterson, Daniel G.

Committee Member

Diehl, Susan V.

Committee Member

Nelson, C. Dana

Committee Member

Magbanua, Zenaida

Date of Degree

12-11-2015

Document Type

Graduate Thesis - Open Access

Major

Agronomy

Degree Name

Master of Science

College

College of Agriculture and Life Sciences

Department

Department of Plant and Soil Sciences

Abstract

A major disease damaging seedlings of Pinus palustris is caused by the fungus Mycosphaerella dearnessii. Population structure of this pathogen was studied in a population in Mississippi. High genetic diversity (0.65) was measured using microsatellite markers and coincides with the high number of vegetative compatibly groups observed. A 30 Mb genome sequence for a single isolate of M. dearnessii was assembled, representing 65% of the estimated genome size. Nearly all (93%) of the core set of genes present in eukaryotes were detected from a total of 10,996 predicted genes. A total of 853 enzymatic associations were identified along with several genes homologous to pathogenic genes in other fungal pathogens. These results provide insights into the infection process and host-pathogen interactions. Further investigating this pathosystem will lead to effective disease management strategies.

URI

https://hdl.handle.net/11668/19599

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